BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023H01SP1|AL428123
(772 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1521 1184 0.0
>3x_Contig1521
Length = 8057
Score = 1184 bits (588), Expect = 0.0
Identities = 715/769 (92%), Gaps = 1/769 (0%)
Strand = Plus / Minus
Query: 3 tgtttatttatgattaggttagtgatgatattagttttttttttttttttttcgtatgmg 62
||||||| ||||| ||||||||||||| | ||| ||||||||||| |||| |||||| |
Sbjct: 8032 tgtttatccatgatcaggttagtgatgacactagctttttttttttctttt-cgtatgcg 7974
Query: 63 tgagtgctgcactcaattgtaattaggaaaattaggatttttgtwatwwagtggtttggg 122
|||||||||||||||||||||||||||| ||| | |||| | || ||||| |||||
Sbjct: 7973 tgagtgctgcactcaattgtaattagganaatcacgattcccgcaataaagtggcttggg 7914
Query: 123 tctggaccattttaacttttcaaatgttttttggaggtatttwatatgaaatataaasat 182
|||||||||||||||||| ||||| || || ||||| |||| | |||||||||||| ||
Sbjct: 7913 tctggaccattttaacttctcaaacgtccttcggaggcatttaaaatgaaatataaacat 7854
Query: 183 tgatttgatgatgagcacatattagggtggtgttgttatgaagggctaaaatagatcgac 242
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 7853 tgatttgatgatgagcacatattagggtggtgttgttatgaagggccaaaacagaccgac 7794
Query: 243 ttttttttagtcggaaatwtaaakwkggaaggntgaaaagggtttggcccatggagaaga 302
||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||
Sbjct: 7793 tttttcttagtcggaaatacaaagagggaaggccgaaaagggtttggcccatggagaaga 7734
Query: 303 gagctgcaaggatgtgcatcacggtttgggcacttttcgaggtcttagttcatacattty 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7733 gagctgcaaggatgtgcatcacggtttgggcacttttcgaggtcttagttcatacatttc 7674
Query: 363 cttcgttcagtttcaaccttttttttaagggtcttatkwkawatgttcggtgggngtatt 422
||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||
Sbjct: 7673 cttcgttcagtttcaaccttttttttaagggtcttatgagaaatgctcggtgggcgtatt 7614
Query: 423 aagttganggtgatgttttttaagagtggnatttagtgcaagaaggtattgtgtcagtgg 482
||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 7613 aagttgacggtgatgttttctaagagtggcatttagtgcaagaaggtattgtgtcagtgg 7554
Query: 483 aataggtaaatccgtgaagttttctgataggcagctcaaaggtacctttgaaagggttct 542
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7553 aataggtacatccgtgaagttttctgataggcagctcaaaggtacctttgaaagggttct 7494
Query: 543 tccacttatcttacaagcctattcaaaataataccaattaaggggagtaaaatgttagta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7493 tccacttatcttacaagcctattcaaaataataccaattaaggggagtaaaatgttagta 7434
Query: 603 catccgttcagtgctcttttgttccagtgggaacatattgttggaaggtacgacacatac 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7433 catccgttcagtgctcttttgttccagtgggaacatattgttggaaggtacgacacatac 7374
Query: 663 attggagaaaactgccaatttctttatgatagtttcgatttcaaattygttctcatccgg 722
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 7373 attggagaaaactgccaatttctttatgatagtttccatttcaaattcgttctcatccgg 7314
Query: 723 aaatatgatttcagaattaatcatttcttgcgttatatttgttaggwtt 771
|||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7313 aaatatgatttcagaattaatcatttcttgcgttatatttgttaggatt 7265
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,614
Number of Sequences: 1807
Number of extensions: 17614
Number of successful extensions: 4546
Number of sequences better than 1.0e-20: 1
length of query: 772
length of database: 10,358,551
effective HSP length: 16
effective length of query: 756
effective length of database: 10,329,639
effective search space: 7809207084
effective search space used: 7809207084
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.2 bits)